A common use case of the QGIS TimeManager plugin is visualizing tracking data such as animal migration data. This post illustrates the steps necessary to create an animation from bird migration data. I’m using a dataset published on Movebank:

Fraser KC, Shave A, Savage A, Ritchie A, Bell K, Siegrist J, Ray JD, Applegate K, Pearman M (2016) Data from: Determining fine-scale migratory connectivity and habitat selection for a migratory songbird by using new GPS technology. Movebank Data Repository. doi:10.5441/001/1.5q5gn84d.

It’s a CSV file which can be loaded into QGIS using the Add delimited text layer tool. Once loaded, we can get started:

1. Identify time and ID columns

Especially if you are new to the dataset, have a look at the attribute table and identify the attributes containing timestamps and ID of the moving object. In our sample dataset, time is stored in the aptly named timestamp attribute and uses ISO standard formatting %Y-%m-%d %H:%M:%S.%f. This format is ideal for TimeManager and we can use it without any changes. The object ID attribute is titled individual-local-identifier.

movebank_data

The dataset contains 128 positions of 14 different birds. This means that there are rather long gaps between consecutive observations. In our animation, we’ll want to fill these gaps with interpolated positions to get uninterrupted movement traces.

2. Configuring TimeManager

To set up the animation, go to the TimeManager panel and click Settings | Add Layer. In the following dialog we can specify the time and ID attributes which we identified in the previous step. We also enable linear interpolation. The interpolation option will create an additional point layer in the QGIS project, which contains the interpolated positions.

timemanager_settings

When using the interpolation option, please note that it currently only works if the point layer is styled with a Single symbol renderer. If a different renderer is configured, it will fail to create the interpolation layer.

Once the layer is configured, the minimum and maximum timestamps will be displayed in the TimeManager dock right bellow the time slider. For this dataset, it makes sense to set the Time frame size, that is the time between animation frames, to one day, so we will see one frame per day:

timemanager_dock

Now you can test the animation by pressing the TimeManager’s play button. Feel free to add more data, such as background maps or other layers, to your project. Besides exploring the animated data in QGIS, you can also create a video to share your results.

3. Creating a video

To export the animation, click the Export video button. If you are using Linux, you can export videos directly from QGIS. On Windows, you first need to export the animation frames as individual pictures, which you can then convert to a video (for example using the free Windows Movie Maker application).

These are the basic steps to set up an animation for migration data. There are many potential extensions to this animation, including adding permanent traces of past movements. While this approach serves us well for visualizing bird migration routes, it is easy to imagine that other movement data would require different interpolation approaches. Vehicle data, for example, would profit from network-constrained interpolation between observed positions.

If you find the TimeManager plugin useful, please consider supporting its development or getting involved. Many features, such as interpolation, are weekend projects that are still in a proof-of-concept stage. In addition, we have the huge upcoming challenge of migrating the plugin to Python 3 and Qt5 to support QGIS3 ahead of us. Happy QGISing!

Broken Processing models are nasty and this error is particularly unpleasant:

...
File "/home/agraser/.qgis2/python/plugins/processing/modeler/
ModelerAlgorithm.py", line 110, in algorithm
self._algInstance = ModelerUtils.getAlgorithm(self.consoleName).getCopy()
AttributeError: 'NoneType' object has no attribute 'getCopy'

It shows up if you are trying to open a model in the model editor that contains an algorithm which Processing cannot find.

For example, when I upgraded to Ubuntu 16.04, installing a fresh QGIS version did not automatically install SAGA. Therefore, any model with a dependency on SAGA was broken with the above error message. Installing SAGA and restarting QGIS solves the issue.

Since I’ve started working, transport and movement data have been at the core of many of my projects. The spatial nature of movement data makes it interesting for GIScience but typical GIS tools are not a particularly good match.

Dealing with the temporal dynamics of geographic processes is one of the grand challenges for Geographic Information Science. Geographic Information Systems (GIS) and related spatial analysis methods are quite adept at handling spatial dimensions of patterns and processes, but the temporal and coupled space-time attributes of phenomena are difficult to represent and examine with contemporary GIS. (Dr. Paul M. Torrens, Center for Urban Science + Progress, New York University)

It’s still a hot topic right now, as the variety of related publications and events illustrates. For example, just this month, there is an Animove two-week professional training course (18–30 September 2016, Max-Planck Institute for Ornithology, Lake Konstanz) as well as the GIScience 2016 Workshop on Analysis of Movement Data (27 September 2016, Montreal, Canada).

Space-time cubes and animations are classics when it comes to visualizing movement data in GIS. They can be used for some visual analysis but have their limitations, particularly when it comes to working with and trying to understand lots of data. Visualization and analysis of spatio-temporal data in GIS is further complicated by the fact that the temporal information is not standardized in most GIS data formats. (Some notable exceptions of formats that do support time by design are GPX and NetCDF but those aren’t really first-class citizens in current desktop GIS.)

Most commonly, movement data is modeled as points (x,y, and optionally z) with a timestamp, object or tracker id, and potential additional info, such as speed, status, heading, and so on. With this data model, even simple questions like “Find all tracks that start in area A and end in area B” can become a real pain in “vanilla” desktop GIS. Even if the points come with a sequence number, which makes it easy to identify the start point, getting the end point is tricky without some custom code or queries. That’s why I have been storing the points in databases in order to at least have the powers of SQL to deal with the data. Even so, most queries were still painfully complex and performance unsatisfactory.

So I reached out to the Twitterverse asking for pointers towards moving objects database extensions for PostGIS and @bitnerd, @pwramsey, @hruske, and others replied. Amongst other useful tips, they pointed me towards the new temporal support, which ships with PostGIS 2.2. It includes the following neat functions:

  • ST_IsValidTrajectory — Returns true if the geometry is a valid trajectory.
  • ST_ClosestPointOfApproach — Returns the measure at which points interpolated along two lines are closest.
  • ST_DistanceCPA — Returns the distance between closest points of approach in two trajectories.
  • ST_CPAWithin — Returns true if the trajectories’ closest points of approach are within the specified distance.

Instead of  points, these functions expect trajectories that are stored as LinestringM (or LinestringZM) where M is the time dimension. This approach makes many analyses considerably easier to handle. For example, clustering trajectory start and end locations and identifying the most common connections:

animation_clusters

(data credits: GeoLife project)

Overall, it’s an interesting and promising approach but there are still some open questions I’ll have to look into, such as: Is there an efficient way to store additional info for each location along the trajectory (e.g. instantaneous speed or other status)? How well do desktop GIS play with LinestringM data and what’s the overhead of dealing with it?

In the previous post, Mickael shared a great map design. The download includes a print composer template, that you can use to recreate the design in a few simple steps:

1. Create a new composition based on a template

Open the Composer manager and configure it to use a specific template. Then you can select the .qpt template file and press the Add button to create a new composition based on the template.

2. Update image item paths

If the template uses images, the paths to the images most likely need to be fixed since the .qpt file stores absolute file paths instead of relative ones.

update_image_paths

With these steps, you’re now ready to use the design for your own maps. Happy QGISing!

This is a guest post by Mickael HOARAU @Oneil974

For those wishing to get a stylized map on QGIS composer, I’ve been working on a tutorial to share with you a project I’m working on. Fan of web design and GIS user since few years, I wanted to merge Material Design Style with Map composer. Here is a tutorial to show you how to make simply a Material Design Map style on QGIS.

This slideshow requires JavaScript.

You can download tutorial here:

Tutorial Material Design Map

And sources here:

Sources Material Design Map

An Atlas Powered version is coming soon!

Over the last two weeks, I had the pleasure to attend both the international FOSS4G conference in Bonn, Germany, as well as the regional FOSS4G-NOR in Oslo, Norway. Both events were superbly organized and provided tons of possibilities to share experiences and find new inspiration.

Talks at both conferences have been recorded and can be watched online: Bonn / Oslo

I enjoyed having the opportunity to give two very different talks. In Bonn, I presented work on pedestrian routing and navigation, which was developed within the PERRON project:

It was particularly nice that we had plenty of time for Q&A after this presentation since only two talks were scheduled for this session rather than the usual three. I’d also like to thank everyone for the great feedback – both in person and on Twitter!

In Oslo, I had the honor to give the opening keynote on OpenSource in general and the QGIS project in particular:

2 – Anita Graser – QGIS – A Community-powered GIS Project from krokskogstrollet on Vimeo.

Both conferences were packed with great sessions and talks. If I had to pick favorites from last week’s presentations, I would have to opt for Iván Sánchez presenting his latest projects, including what3fucks and geohaiku:

6 – Iván Sánchez Ortega, Mazemap – Addressing NSFW Geodesic Grids from krokskogstrollet on Vimeo.

Followed closely by the impressive project presentations of the student organizers of FOSS4G-NOR:

10 – Program Committee – What are the results when students use Open Source? from krokskogstrollet on Vimeo.

All three projects: OPPTUR, GISTYLE, and the flexible traffic web viewer were great demos of what can be achieved with open source tools. Mathilde’s GISTYLE project is also available on Github.

An inspiring GISummer comes to an end, but with so many videos to watch and workshop materials to explore, I’m convinced that the autumn will be no less exciting.

It’s been a great week in Bonn! I joined the other members of the QGIS project at the pre-FOSS4G code sprint at the Basecamp, the weirdest location we’ve had for a developer meeting so far. We used this opportunity to have a face-to-face meeting of the QGIS PSC  with special guests Matthias Kuhn (on QGIS 3.0 and bug tracker discussions) and Lene Fischer (on community team issues)  – notes here.

picture by Tim Sutton

QGIS PSC meeting in action (from left to right: Otto Dassau, Paolo Cavallini, Anita Graser, Andreas Neumann, Jürgen E. Fischer), picture by Tim Sutton

I also finally took the time to compile a blog post on the results of the QGIS user survey 2015.

The code sprint was also a great opportunity to present the results of Akbar Gumbira’s Google Summer of Code project: the QGIS Resource Sharing plugin. This plugin makes it possible to easily share resources (such as SVG icons, symbol definitions, QGIS styles, and Processing scripts) with other QGIS users through an interface that closely resembles the well-known QGIS Plugin Manager. Akbar has also prepared great presentation with background info and screencasts showcasing his project.

QGIS Resource Sharing presentation, picture by @foss4g

QGIS Resource Sharing presentation, picture by @foss4g

The plugin is now available in the Plugin Repository and we have created the official QGIS Resources repository on Github. If you have symbols or styles that you want to share with the community, please create a resource collection and send us a pull request to add it to the official list.

Thanks to all the organizers who worked hard to make this one of the most well-organized and enjoyable code sprints I’ve ever been to. You are awesome!

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